Imaging Solutions Application Library
Confocal 3D image of an anther from the plant Arabidopsis thaliana
Dr. Mayandi Sivaguru
Microscopy Facility Manager
Institute for Genomic Biology
University of Illinois
1206 W. Gregory
Urbana, Illinois 61801 USA
http://core.igb.illinois.edu/
Overview confocal applications
plant Arabidopsis thaliana by Sivaguru
Microscopy and Imaging Methods:
A Z-stack comprised of 262 optical sections was collected using a 25X /0.8 LD LCI Plan-Apochromat objective using glycerin as immersion medium at an interval of 1.4 µm with 1024x1024 frame size and a XY pixel size of 330 nm. The images were collected using a 488 nm Argon laser with a pixel dwell time of 1.27 µs and the emission light was collected between 595-666 nm using a MBS 488. The maximum intensity projection image of the z-stack was produced using the Zen software supplied with the LSM 710.
A confocal z-stack maximum intensity projection of an Arabidopsis thaliana anther (left) and part of a petal (right) labeled with periodic acid and propidium iodide that has been cleared and mounted in Hoyer’s solution containing chloral hydrate.